6 Commits
Author SHA1 Message Date
abkslmandClaude Fable 5 17e84c9573 Deep-sweep fixes: cooperative-pool starvation, stdio tail loss, epoll integrity, UI pins
Host — the two remaining app-wide stall mechanisms plus main-thread pins
found by mining all nine hang reports:
- LinuxProcess.startStdinRelay wrote to a BLOCKING stdin fd on a
  width-limited cooperative-pool thread, non-cancellably; wedged guests
  starved the whole concurrency runtime (decode loops, watchdogs — an
  app-wide freeze surviving the reconcile fix). Writes now offload to a
  per-process GCD queue (vendored patch #18).
- TranscriptWriter (actor) did blocking write/fsync on the cooperative
  pool; it now runs on its own DispatchSerialQueue executor.
- UserMessageBubble's truncation probe typeset entire pasted-log-sized
  messages through CoreText per layout pass (100% main-thread pins in
  the 07-21 hang reports); certainly-long messages now skip the probe
  and render a prefix while collapsed.
- toolGroupSignature JSON-encoded every tool input in the transcript up
  to 12.5x/s on the MainActor; now a structural hash. The summary pass
  is trailing-throttled to 0.4s, and flatItems joins streaming chunks
  once instead of re-copying the prefix per delta.
- StatusFeedFetcher.parseDate allocated three formatters per call (86%
  of a pool thread in the 07-26 report); now shared statics.

Guest (vminitd) — teardown data loss and epoll registration hazards:
- IOPair no longer closes on a bare EPOLLHUP with a backpressure flush
  in flight (dropped the CLI's final output line); EPOLLOUT finishes the
  flush, then EOF closes loss-free. ManagedProcess.setExit closes only
  stdin, letting stdout/stderr self-close on EOF, with an 8s grace pass
  (patch #16).
- Epoll events carry a registration generation; the supervisor ignores
  stale events for recycled fd numbers. registerFd refuses EEXIST
  instead of clobbering the existing handler. TerminalIO's stdin relay
  writes a dup of the terminal fd so its backpressure registration
  can't collide with the stdout relay's (patch #17).
- VsockProxy flushes bytes parked toward the surviving peer on hangup,
  closes the dialing socket on a failed backend connect, and
  StandardIO/TerminalIO clean up partially-created pairs on setup
  failure (patch #16).

Full suite: 1451+292+74+20 tests, two failures — both pre-existing
environmental (MacVM base image absent on this machine; a load-flaky
liveness test that passes 3/3 in isolation).

Co-Authored-By: Claude Fable 5 <[email protected]>
2026-07-28 15:35:35 -07:00
abkslmandClaude Opus 4.8 4793a4b5bc containerization: guard patch #3's 'import os' behind #if canImport(os)
The swiftly toolchain used by the vminit-image CI resolves Foundation/
Virtualization but not the 'os' overlay, so 'import os' failed with
"no such module 'os'". Guarding the diagnostic logger degrades it to a
no-op under such toolchains while local (Xcode) builds keep it.

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-07-13 19:15:11 -07:00
abkslmandClaude Opus 4.8 7972dfb02d Container isolation: fix stdio stall + per-exec connection leak; add guest image pipeline
Host-side (ships with a normal swift build):
- LinuxProcess: non-blocking stdio relay (O_NONBLOCK + nucleicDrainNonBlocking)
  so a wedged stream can't head-of-line-block sibling execs' relays; atomic
  stdio-or-abort start (patches #5, #6).
- Vminitd: bounded deleteProcess timeout so teardown can't hang a wedged
  channel (patch #7).
- ContainerizedProcessHandle: call LinuxProcess.delete() after exit and on
  force-close — fixes a per-turn leak (per-exec vsock/gRPC connection +
  runConnections() task) in the long-lived shared control container. Likely
  the "degrades until app restart" root cause.
- ClaudeCodeBackend: map the atomic-start abort to a recoverable AgentError so
  a failed launch settles as retryable instead of locking the composer.

Guest-side (rides the custom vminitd initfs; inert until the image is built):
- ManagedProcess: offload the blocking start off the gRPC event loop (patch #8).
- Per-exec cgroups (patch #9) recorded as design only — cross-cutting.

Pipeline:
- .github/workflows/vminit-image.yml builds vminitd from the vendored source
  and pushes ghcr.io/abkslm/vminit; ContainerEngine.vminitReference repointed
  at the custom image.

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-07-13 18:46:48 -07:00
NucleicandClaude Opus 4.8 4bcf34d91a Nucleic Control: spawn watchdog + reliable Stop + stdio diagnostics
Containerized control sessions could hang with no output ("Working…" forever): the agent's exec
stdio over the vminitd vsock channel intermittently failed to carry bytes, so claude ran and
reached the approval server but its stdin/stdout never connected — it idled in interactive
stream-json mode and never exited. Forensics (nucleic.sqlite + per-session claude-home MCP logs)
showed every stdio layer byte-identical to a working state, i.e. a flaky framework race, not a
regression in our code. Make the failure recoverable and visible instead of an eternal spinner:

- ClaudeCodeBackend: a 60s spawn watchdog on containerized runs — no first stdout → emit a
  recoverable error (with guest stderr + container probe), SIGKILL the wedged process, and finish
  the run errored, instead of awaiting stdoutLines forever.
- Stop reliability: ProcessHandle.forceCloseStreams() (ContainerizedProcessHandle finishes its
  line streams host-side; default no-op for the host pipe handle), wired into every kill
  escalation (terminate/interruptThenKill/killGroupAfter) so a force-killed run always settles
  even when the guest wait/stdio RPC wedges — the real cause of "Stop is inconsistent".
- Cap MCP_TIMEOUT (connection) to 60s so an unreachable approval server can't wedge startup for
  ~24.8 days; MCP_TOOL_TIMEOUT stays unbounded for human-answered approvals.
- LinuxProcess.setupIO logs which stdio stream fails to connect (os.Logger, com.nucleic /
  container-io) so a stall pinpoints the failing stream. Vendored patch #3.
- Tests: stop-escalation force-close, responsive-process no-op, MCP timeout asymmetry.

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-06-25 17:37:46 -07:00
NucleicandClaude Opus 4.8 050605b13e Fix Nucleic Control container breakage: balloon, stop, interceptor
Root-cause and fix the four reported container regressions plus two
adjacent confirmed bugs.

- Memory balloon (CPU 100% + output freeze that never recovered): the
  autoballoon drove the whole-VM target from a per-container cgroup figure
  with no guest swap, spinning a swapless guest in perpetual direct
  reclaim. Default memoryManagement to off; make the target whole-VM-aware
  (reserveBytes) so it never inflates below the working set plus the
  guest's non-cgroup footprint; deflate the balloon on a failed stats read
  instead of freezing it inflated.
- Stop button: signal the agent's whole process group (new vendored
  LinuxProcess.killProcessGroup, negative pid) so forked children die too;
  replace the unbounded wait() in every teardown/shutdown with a bounded
  terminate() that escalates SIGTERM -> SIGKILL; interrupt escalates to a
  group kill so a wedged agent always stops.
- MCPApprovalServer port-0 race: single-flight start(host:) so concurrent
  sessions sharing one control-container server all receive the real bound
  port; publish listener+port only after .ready (a failed bind no longer
  pins a stale port 0); guard the Claude call site against port 0.
- Container CPU metric: divide the CPU delta by the actual measured window
  instead of a fixed 200 ms, so it stops over-reading under load.
- Command interceptor: drop the ~40 coreutil Node shims so cat/grep/etc
  run their native binaries (no Node-per-command); the bash tracer still
  records them as metadata.
- Make the bash command tracer opt-in (commandTracingEnabled, default
  off) — the per-command DEBUG trap only activates when enabled; the
  git/gh interception the conflict/merge system relies on stays always-on.

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-06-25 13:55:31 -07:00
NucleicandClaude Opus 4.8 11b9825e09 Vendor apple/containerization with a VM-extensions forwarding patch
Switch the containerization dependency from the github URL to a vendored copy
(third_party/containerization, upstream commit 6b7b42ca) referenced by path, so
we can carry a small local patch that upstream lacks: LinuxContainer.Configuration
gains a `vmExtensions` field forwarded into VMConfiguration.extensions. Upstream
already supports VMConfiguration.extensions + the VZInstanceExtension hook, but
LinuxContainer — our only entry point — never forwarded them, so there was no way
to attach a device (e.g. a memory balloon) to a container's VM.

Tests/, docs/, examples/, images/ and the corresponding test targets are trimmed
for footprint (we never build the dependency's tests). See PATCHES.md for the full
diff vs. upstream and the re-vendoring procedure. Also adds the ContainerizationExtras
product to NucleicCore (AddressAllocator, named in the configureVZ signature).

Co-Authored-By: Claude Opus 4.8 <[email protected]>
2026-06-21 20:22:21 -07:00