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nucleic-purpose-classifier/tests/test_train.py
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import sys
import unittest
from pathlib import Path
MODULE_DIR = Path(__file__).resolve().parents[1]
sys.path.insert(0, str(MODULE_DIR))
import train
class MetricsTests(unittest.TestCase):
def test_classification_metrics_include_every_label(self):
actual = list(range(8))
predicted = [0, 1, 2, 3, 4, 5, 6, 0]
metrics = train.classification_metrics(actual, predicted)
self.assertEqual(7 / 8, metrics["accuracy"])
self.assertEqual(0.0, metrics["perPurposeRecall"]["writing"])
self.assertEqual(1.0, metrics["perPurposeRecall"]["planning"])
def test_thresholds_preserve_confidence_nesting(self):
probabilities = [0.99, 0.95, 0.85, 0.75, 0.65]
margins = [0.95, 0.85, 0.60, 0.40, 0.20]
correct = [True, True, True, False, False]
thresholds = train.choose_confidence_thresholds(
probabilities,
margins,
correct,
high_precision=1.0,
accepted_precision=0.75,
)
self.assertGreaterEqual(
thresholds["high"]["minimumScore"],
thresholds["medium"]["minimumScore"],
)
self.assertGreater(thresholds["medium"]["validationAcceptedCoverage"], 0)
def test_expected_calibration_error_is_zero_for_perfect_extremes(self):
self.assertEqual(
0.0,
train.expected_calibration_error([1.0, 0.0], [True, False]),
)
if __name__ == "__main__":
unittest.main()